Gene annotation
Transcriptome id Sobic.002G218700.1
Synonym
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt A0A1B6QCV1
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF305
NCBI CDD KOG0765; Predicted mitochondrial carrier protein
KEGG Orthology K15121; solute carrier family 25, member 44
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72820 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os09g27240.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a014020
Brachypodium PNT64691
Barley HORVU5Hr1G066630.1 , HORVU5Hr1G066630.2 , HORVU5Hr1G066630.3 , HORVU5Hr1G066630.4
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G218700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G347300 TBC domain containing protein, expressed -
2 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
3 Sobic.001G247200 - -
4 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
5 Sobic.010G256000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.003G131200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
7 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
8 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
9 Sobic.004G225700 F-box/LRR-repeat protein 2, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
10 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -
11 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
12 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
13 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
14 Sobic.004G232000 TLD family protein, putative, expressed -
15 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
16 Sobic.004G242700 heat shock protein DnaJ, putative, expressed -
17 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
18 Sobic.004G305400 coronatine-insensitive protein 1, putative, expressed -
19 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
20 Sobic.008G086200 expressed protein -


Gene co-expression network
sample Sobic002G218700 Sobic002G218700 Sobic003G347300 Sobic003G347300 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic001G247200 Sobic001G247200 Sobic002G218700--Sobic001G247200 Sobic009G030300 Sobic009G030300 Sobic002G218700--Sobic009G030300 Sobic010G256000 Sobic010G256000 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic009G253400 Sobic009G253400 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic003G347300--Sobic002G218700 Sobic001G021500 Sobic001G021500 Sobic003G347300--Sobic001G021500 Sobic002G033700 Sobic002G033700 Sobic003G347300--Sobic002G033700 Sobic009G126000 Sobic009G126000 Sobic003G347300--Sobic009G126000 Sobic006G254500 Sobic006G254500 Sobic003G347300--Sobic006G254500 Sobic003G347300--Sobic009G030300 Sobic009G013700 Sobic009G013700 Sobic003G347300--Sobic009G013700 Sobic009G123500 Sobic009G123500 Sobic003G347300--Sobic009G123500 Sobic008G086200 Sobic008G086200 Sobic003G347300--Sobic008G086200 Sobic010G173900 Sobic010G173900 Sobic010G046400--Sobic010G173900 Sobic010G046400--Sobic004G227500 Sobic002G334600 Sobic002G334600 Sobic010G046400--Sobic002G334600 Sobic010G046400--Sobic002G218700 Sobic007G070300 Sobic007G070300 Sobic010G046400--Sobic007G070300 Sobic002G367300 Sobic002G367300 Sobic010G046400--Sobic002G367300 Sobic009G011500 Sobic009G011500 Sobic010G046400--Sobic009G011500 Sobic008G099500 Sobic008G099500 Sobic010G046400--Sobic008G099500 Sobic010G046400--Sobic001G247200 Sobic009G040800 Sobic009G040800 Sobic001G247200--Sobic009G040800 Sobic004G242700 Sobic004G242700 Sobic001G247200--Sobic004G242700 Sobic006G082900 Sobic006G082900 Sobic001G247200--Sobic006G082900 Sobic007G139400 Sobic007G139400 Sobic001G247200--Sobic007G139400 Sobic009G108400 Sobic009G108400 Sobic001G247200--Sobic009G108400 Sobic001G247200--Sobic009G030300 Sobic004G061900 Sobic004G061900 Sobic001G247200--Sobic004G061900 Sobic001G247200--Sobic002G218700 Sobic004G232000 Sobic004G232000 Sobic001G247200--Sobic004G232000 Sobic002G177400 Sobic002G177400 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic008G117200 Sobic008G117200 Sobic009G030300--Sobic008G117200 Sobic009G030300--Sobic002G334600 Sobic008G129700 Sobic008G129700 Sobic009G030300--Sobic008G129700 Sobic004G025100 Sobic004G025100 Sobic010G256000--Sobic004G025100 Sobic006G069100 Sobic006G069100 Sobic010G256000--Sobic006G069100 Sobic010G256000--Sobic002G218700 Sobic001G122200 Sobic001G122200 Sobic010G256000--Sobic001G122200 Sobic008G066900 Sobic008G066900 Sobic010G256000--Sobic008G066900 Sobic009G155400 Sobic009G155400 Sobic010G256000--Sobic009G155400 Sobic002G389200 Sobic002G389200 Sobic010G256000--Sobic002G389200 Sobic005G168300 Sobic005G168300 Sobic010G256000--Sobic005G168300 Sobic002G183300 Sobic002G183300 Sobic010G256000--Sobic002G183300 Sobic010G099800 Sobic010G099800 Sobic003G131200--Sobic010G099800 Sobic002G393200 Sobic002G393200 Sobic003G131200--Sobic002G393200 Sobic003G131200--Sobic002G218700 Sobic006G173200 Sobic006G173200 Sobic003G131200--Sobic006G173200 Sobic009G055400 Sobic009G055400 Sobic003G131200--Sobic009G055400 Sobic001G170100 Sobic001G170100 Sobic003G131200--Sobic001G170100 Sobic003G131200--Sobic009G126000 Sobic003G131200--Sobic004G232000 Sobic010G147833 Sobic010G147833 Sobic003G131200--Sobic010G147833 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic002G316500 Sobic002G316500 Sobic004G227500--Sobic002G316500 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic004G227500--Sobic010G173900 Sobic001G315400 Sobic001G315400 Sobic004G227500--Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic004G227500--Sobic001G367100 Sobic004G227500--Sobic002G334600 Sobic009G253400--Sobic002G218700 Sobic010G170900 Sobic010G170900 Sobic009G253400--Sobic010G170900 Sobic001G261585 Sobic001G261585 Sobic009G253400--Sobic001G261585 Sobic008G007000 Sobic008G007000 Sobic009G253400--Sobic008G007000 Sobic009G253400--Sobic002G183300 Sobic009G253400--Sobic009G055400 Sobic009G253400--Sobic003G347300 Sobic001G372900 Sobic001G372900 Sobic009G253400--Sobic001G372900 Sobic002G132600 Sobic002G132600 Sobic009G253400--Sobic002G132600 Sobic004G225700--Sobic008G086200 Sobic004G225700--Sobic002G218700 Sobic003G077500 Sobic003G077500 Sobic004G225700--Sobic003G077500 Sobic004G225700--Sobic002G393200 Sobic009G175200 Sobic009G175200 Sobic004G225700--Sobic009G175200 Sobic001G385400 Sobic001G385400 Sobic004G225700--Sobic001G385400 Sobic005G159600 Sobic005G159600 Sobic004G225700--Sobic005G159600 Sobic004G225700--Sobic006G254500 Sobic004G134100 Sobic004G134100 Sobic004G225700--Sobic004G134100
Octagon: transcription factors


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