Gene annotation
Transcriptome id Sobic.002G116000.1
Synonym Sb02g009870
Functional annotation starch synthase, putative, expressed
UniProt B3TS62 , B3TS46 , B3TSA6 , B3TS76 , B3TSA0 , B3TS42 , B3TS92 , B3TSC6 , B3TS58 , A4ZVI4
Pfam PF00534 PF08323
Panther DB PTHR12526 PTHR12526:SF346
NCBI CDD -
KEGG Orthology K13679; granule-bound starch synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32900 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os07g22930.3 : starch synthase, putative, expressed
MaizeGDB (Corn) Zm00025a045725 , Zm00025a000017
Brachypodium KQK08383 , KQK08384 , PNT72221
Barley HORVU2Hr1G090980.12 , HORVU2Hr1G090980.13 , HORVU2Hr1G090980.10 , HORVU2Hr1G090980.11 , HORVU2Hr1G090980.16 , HORVU2Hr1G090980.17 , HORVU2Hr1G090980.14 , HORVU2Hr1G090980.15 , HORVU2Hr1G090980.4 , HORVU2Hr1G090980.1 , HORVU2Hr1G090980.2 , HORVU2Hr1G090980.3 , HORVU2Hr1G090980.5 , HORVU2Hr1G090980.6 , HORVU2Hr1G090980.7 , HORVU2Hr1G090980.8 , HORVU2Hr1G090980.9
Wheat TraesCS2A02G373600 , TraesCS2D02G369800 , TraesCS2B02G390700
Populus PNT13601 , PNT13602


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cDNA sequences
Sobic.002G116000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G180800 phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
2 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -
3 Sobic.007G046950 - -
4 Sobic.002G047400 SHOOT1 protein, putative, expressed -
5 Sobic.001G104600 expressed protein -
6 Sobic.005G056400 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
7 Sobic.010G104700 caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
9 Sobic.001G046000 expressed protein -
10 Sobic.004G267000 MYB family transcription factor, putative, expressed -
11 Sobic.009G225600 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
12 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.001G015200 S1 RNA binding domain containing protein, expressed -
14 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
15 Sobic.003G370000 chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
16 Sobic.001G076900 membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.009G163950 - -
18 Sobic.001G104700 expressed protein -
19 Sobic.006G221000 soluble starch synthase 3, chloroplast precursor, putative, expressed -
20 Sobic.004G113100 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase


Gene co-expression network
sample Sobic002G116000 Sobic002G116000 Sobic008G180800 Sobic008G180800 Sobic002G116000--Sobic008G180800 Sobic008G149100 Sobic008G149100 Sobic002G116000--Sobic008G149100 Sobic007G046950 Sobic007G046950 Sobic002G116000--Sobic007G046950 Sobic002G047400 Sobic002G047400 Sobic002G116000--Sobic002G047400 Sobic001G104600 Sobic001G104600 Sobic002G116000--Sobic001G104600 Sobic005G056400 Sobic005G056400 Sobic002G116000--Sobic005G056400 Sobic010G104700 Sobic010G104700 Sobic002G116000--Sobic010G104700 Sobic010G101000 Sobic010G101000 Sobic002G116000--Sobic010G101000 Sobic001G046000 Sobic001G046000 Sobic002G116000--Sobic001G046000 Sobic008G180800--Sobic010G104700 Sobic008G180800--Sobic002G116000 Sobic008G180800--Sobic010G101000 Sobic003G428600 Sobic003G428600 Sobic008G180800--Sobic003G428600 Sobic008G180800--Sobic001G046000 Sobic008G180800--Sobic002G047400 Sobic009G225600 Sobic009G225600 Sobic008G180800--Sobic009G225600 Sobic008G180800--Sobic008G149100 Sobic003G186800 Sobic003G186800 Sobic008G180800--Sobic003G186800 Sobic008G149100--Sobic002G047400 Sobic008G149100--Sobic001G046000 Sobic001G499100 Sobic001G499100 Sobic008G149100--Sobic001G499100 Sobic003G228300 Sobic003G228300 Sobic008G149100--Sobic003G228300 Sobic001G509200 Sobic001G509200 Sobic008G149100--Sobic001G509200 Sobic004G153900 Sobic004G153900 Sobic008G149100--Sobic004G153900 Sobic008G149100--Sobic010G104700 Sobic001G393300 Sobic001G393300 Sobic008G149100--Sobic001G393300 Sobic008G149100--Sobic010G101000 Sobic007G046950--Sobic001G104600 Sobic001G015200 Sobic001G015200 Sobic007G046950--Sobic001G015200 Sobic007G046950--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic007G046950--Sobic002G030900 Sobic002G060800 Sobic002G060800 Sobic007G046950--Sobic002G060800 Sobic001G104700 Sobic001G104700 Sobic007G046950--Sobic001G104700 Sobic007G046950--Sobic002G047400 Sobic003G103300 Sobic003G103300 Sobic007G046950--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic007G046950--Sobic004G125800 Sobic002G047400--Sobic009G225600 Sobic002G047400--Sobic008G149100 Sobic002G047400--Sobic003G186800 Sobic002G047400--Sobic001G046000 Sobic002G047400--Sobic003G228300 Sobic002G047400--Sobic001G015200 Sobic002G047400--Sobic010G101000 Sobic002G047400--Sobic001G509200 Sobic001G485100 Sobic001G485100 Sobic002G047400--Sobic001G485100 Sobic001G104600--Sobic001G104700 Sobic001G104600--Sobic001G015200 Sobic001G104600--Sobic007G046950 Sobic001G411100 Sobic001G411100 Sobic001G104600--Sobic001G411100 Sobic001G104600--Sobic002G030900 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic001G104600--Sobic010G101000 Sobic007G161500 Sobic007G161500 Sobic005G056400--Sobic007G161500 Sobic004G305800 Sobic004G305800 Sobic005G056400--Sobic004G305800 Sobic003G127800 Sobic003G127800 Sobic005G056400--Sobic003G127800 Sobic003G370000 Sobic003G370000 Sobic005G056400--Sobic003G370000 Sobic010G188300 Sobic010G188300 Sobic005G056400--Sobic010G188300 Sobic001G076900 Sobic001G076900 Sobic005G056400--Sobic001G076900 Sobic001G491000 Sobic001G491000 Sobic005G056400--Sobic001G491000 Sobic001G329400 Sobic001G329400 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic010G104700--Sobic001G046000 Sobic003G304300 Sobic003G304300 Sobic010G104700--Sobic003G304300 Sobic010G104700--Sobic010G101000 Sobic004G344600 Sobic004G344600 Sobic010G104700--Sobic004G344600 Sobic010G104700--Sobic004G153900 Sobic010G104700--Sobic009G225600 Sobic002G161400 Sobic002G161400 Sobic010G104700--Sobic002G161400 Sobic010G104700--Sobic008G180800 Sobic002G351200 Sobic002G351200 Sobic010G104700--Sobic002G351200 Sobic004G267700 Sobic004G267700 Sobic010G101000--Sobic004G267700 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic004G268400 Sobic004G268400 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic001G046000--Sobic009G225600 Sobic001G046000--Sobic001G485100 Sobic001G046000--Sobic010G104700 Sobic001G046000--Sobic002G047400 Sobic001G046000--Sobic003G186800 Sobic001G046000--Sobic010G101000 Sobic006G090100 Sobic006G090100 Sobic001G046000--Sobic006G090100 Sobic001G046000--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic001G046000--Sobic006G191500
Octagon: transcription factors


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