Gene annotation
Transcriptome id Sobic.010G257000.1
Synonym ARR11
Functional annotation two-component response regulator, putative, expressed
UniProt A0A194YLI8
Pfam PF00072
Panther DB PTHR26402 PTHR26402:SF593
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT1G67710 : response regulator 11
RAP-DB (Rice) LOC_Os01g67770.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a018418
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
2 Sobic.010G175000 expressed protein -
3 Sobic.002G168000 expressed protein -
4 Sobic.009G224300 expressed protein -
5 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
6 Sobic.008G048966 - -
7 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
8 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
9 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
10 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
11 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
12 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
13 Sobic.006G226000 expressed protein -
14 Sobic.005G153000 agenet domain containing protein, expressed -
15 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
16 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
17 Sobic.009G207400 ATP binding protein, putative, expressed -
18 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
19 Sobic.003G102700 exostosin family protein, putative, expressed -
20 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase


Gene co-expression network
sample Sobic010G257000 Sobic010G257000 Sobic009G188900 Sobic009G188900 Sobic010G257000--Sobic009G188900 Sobic010G175000 Sobic010G175000 Sobic010G257000--Sobic010G175000 Sobic002G168000 Sobic002G168000 Sobic010G257000--Sobic002G168000 Sobic009G224300 Sobic009G224300 Sobic010G257000--Sobic009G224300 Sobic001G027500 Sobic001G027500 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic006G281900 Sobic006G281900 Sobic010G257000--Sobic006G281900 Sobic010G250400 Sobic010G250400 Sobic010G257000--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic010G257000--Sobic006G016700 Sobic009G188900--Sobic002G168000 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic001G199500 Sobic001G199500 Sobic009G188900--Sobic001G199500 Sobic006G275500 Sobic006G275500 Sobic009G188900--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic009G188900--Sobic001G425700 Sobic001G290500 Sobic001G290500 Sobic009G188900--Sobic001G290500 Sobic005G153000 Sobic005G153000 Sobic009G188900--Sobic005G153000 Sobic007G187700 Sobic007G187700 Sobic009G188900--Sobic007G187700 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G175000--Sobic010G257000 Sobic006G226000 Sobic006G226000 Sobic010G175000--Sobic006G226000 Sobic010G175000--Sobic009G188900 Sobic010G175000--Sobic006G281900 Sobic010G175000--Sobic006G275500 Sobic010G175000--Sobic006G016700 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic003G147500 Sobic003G147500 Sobic009G224300--Sobic003G147500 Sobic009G224300--Sobic006G016700 Sobic004G286200 Sobic004G286200 Sobic009G224300--Sobic004G286200 Sobic001G493100 Sobic001G493100 Sobic009G224300--Sobic001G493100 Sobic007G219100 Sobic007G219100 Sobic009G224300--Sobic007G219100 Sobic009G207400 Sobic009G207400 Sobic009G224300--Sobic009G207400 Sobic003G350400 Sobic003G350400 Sobic009G224300--Sobic003G350400 Sobic007G082000 Sobic007G082000 Sobic009G224300--Sobic007G082000 Sobic009G224300--Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic001G027500--Sobic002G168000 Sobic008G063600 Sobic008G063600 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic001G027500--Sobic006G226000 Sobic006G262501 Sobic006G262501 Sobic001G027500--Sobic006G262501 Sobic001G027500--Sobic002G055800 Sobic001G027500--Sobic007G187700 Sobic001G027500--Sobic005G153000 Sobic001G244900 Sobic001G244900 Sobic008G048966--Sobic001G244900 Sobic001G019200 Sobic001G019200 Sobic008G048966--Sobic001G019200 Sobic003G104100 Sobic003G104100 Sobic008G048966--Sobic003G104100 Sobic008G048966--Sobic009G207400 Sobic006G240900 Sobic006G240900 Sobic008G048966--Sobic006G240900 Sobic009G200000 Sobic009G200000 Sobic008G048966--Sobic009G200000 Sobic008G048966--Sobic010G257000 Sobic001G296100 Sobic001G296100 Sobic008G048966--Sobic001G296100 Sobic001G395200 Sobic001G395200 Sobic008G048966--Sobic001G395200 Sobic006G281900--Sobic002G168000 Sobic006G281900--Sobic002G021200 Sobic006G281900--Sobic009G188900 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic010G250400--Sobic009G188900 Sobic010G250400--Sobic005G153000 Sobic010G250400--Sobic002G021200 Sobic010G250400--Sobic003G147500 Sobic010G250400--Sobic002G168000 Sobic010G250400--Sobic009G207400 Sobic010G250400--Sobic007G187700 Sobic001G054700 Sobic001G054700 Sobic010G250400--Sobic001G054700 Sobic001G532800 Sobic001G532800 Sobic010G250400--Sobic001G532800 Sobic006G016700--Sobic003G147500 Sobic006G016700--Sobic006G275500 Sobic002G256900 Sobic002G256900 Sobic006G016700--Sobic002G256900 Sobic006G016700--Sobic006G226000 Sobic007G050800 Sobic007G050800 Sobic006G016700--Sobic007G050800 Sobic006G016700--Sobic002G168000 Sobic006G016700--Sobic007G187700 Sobic008G052300 Sobic008G052300 Sobic006G016700--Sobic008G052300 Sobic006G016700--Sobic005G153000
Octagon: transcription factors


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