Gene annotation
Transcriptome id Sobic.009G140600.1
Synonym Sb09g020600
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5YY52
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF752
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G38520 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g34630.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037390
Brachypodium KQK06211
Barley HORVU1Hr1G064290.10 , HORVU1Hr1G064290.8 , HORVU1Hr1G064290.9 , HORVU1Hr1G064290.1 , HORVU1Hr1G064290.2 , HORVU1Hr1G064290.3 , HORVU1Hr1G064290.4 , HORVU1Hr1G064290.5 , HORVU1Hr1G064290.6 , HORVU1Hr1G064290.7
Wheat TraesCS1A02G262100 , TraesCS1A02G262100 , TraesCS1A02G262100 , TraesCS1D02G262100 , TraesCS1D02G262100 , TraesCS1D02G262100 , TraesCS1B02G272700 , TraesCS1B02G272700 , TraesCS1B02G272700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
2 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
3 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
4 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
5 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
6 Sobic.005G194100 expressed protein -
7 Sobic.007G052400 rubredoxin family protein, putative, expressed -
8 Sobic.001G005200 expressed protein -
9 Sobic.009G043000 thioredoxin, putative, expressed -
10 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
11 Sobic.002G051100 Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
12 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
13 Sobic.004G012900 expressed protein -
14 Sobic.008G134800 shikimate kinase, putative, expressed -
15 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
16 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
17 Sobic.001G489000 NAD(P)-linked oxidoreductase superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@putativ eribonuclease P, putative, expressed -
18 Sobic.007G225500 expressed protein -
19 Sobic.010G245200 expressed protein -
20 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family


Gene co-expression network
sample Sobic009G140600 Sobic009G140600 Sobic003G002300 Sobic003G002300 Sobic009G140600--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic009G140600--Sobic008G102000 Sobic003G378600 Sobic003G378600 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic001G122300 Sobic001G122300 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic009G140600--Sobic007G052400 Sobic001G005200 Sobic001G005200 Sobic009G140600--Sobic001G005200 Sobic009G043000 Sobic009G043000 Sobic009G140600--Sobic009G043000 Sobic003G002300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic003G002300--Sobic007G225500 Sobic003G002300--Sobic009G140600 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic010G201700 Sobic010G201700 Sobic003G002300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic003G002300--Sobic001G519800 Sobic010G005500 Sobic010G005500 Sobic003G002300--Sobic010G005500 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic008G102000--Sobic007G225500 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic003G378600--Sobic009G140600 Sobic003G378600--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic004G175500 Sobic004G175500 Sobic003G387800--Sobic004G175500 Sobic007G004800 Sobic007G004800 Sobic003G387800--Sobic007G004800 Sobic003G387800--Sobic003G002300 Sobic003G387800--Sobic009G140600 Sobic003G387800--Sobic010G005500 Sobic009G030900 Sobic009G030900 Sobic003G387800--Sobic009G030900 Sobic003G387800--Sobic007G052400 Sobic009G143100 Sobic009G143100 Sobic003G387800--Sobic009G143100 Sobic008G134800 Sobic008G134800 Sobic003G387800--Sobic008G134800 Sobic001G128600 Sobic001G128600 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic001G122300--Sobic004G012900 Sobic002G112400 Sobic002G112400 Sobic001G122300--Sobic002G112400 Sobic010G245200 Sobic010G245200 Sobic001G122300--Sobic010G245200 Sobic001G122300--Sobic003G002300 Sobic006G265900 Sobic006G265900 Sobic001G122300--Sobic006G265900 Sobic005G194100--Sobic009G140600 Sobic005G194100--Sobic008G102000 Sobic009G183700 Sobic009G183700 Sobic005G194100--Sobic009G183700 Sobic010G160700 Sobic010G160700 Sobic005G194100--Sobic010G160700 Sobic005G194100--Sobic004G239100 Sobic008G171300 Sobic008G171300 Sobic005G194100--Sobic008G171300 Sobic001G489000 Sobic001G489000 Sobic005G194100--Sobic001G489000 Sobic005G194100--Sobic003G387800 Sobic005G194100--Sobic009G030900 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic007G052400--Sobic004G012900 Sobic007G052400--Sobic008G171300 Sobic007G052400--Sobic007G225500 Sobic007G052400--Sobic009G183700 Sobic007G052400--Sobic009G030900 Sobic007G052400--Sobic008G102000 Sobic007G052400--Sobic002G233700 Sobic001G005200--Sobic003G378600 Sobic001G005200--Sobic001G128600 Sobic001G005200--Sobic008G102000 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic001G005200--Sobic010G245200 Sobic001G005200--Sobic002G233700 Sobic003G387100 Sobic003G387100 Sobic001G005200--Sobic003G387100 Sobic001G005200--Sobic001G122300 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic009G043000--Sobic004G272100 Sobic006G207800 Sobic006G207800 Sobic009G043000--Sobic006G207800 Sobic009G043000--Sobic009G140600 Sobic009G043000--Sobic001G519800
Octagon: transcription factors


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