Gene annotation
Transcriptome id Sobic.009G073900.1
Synonym ACHT2, Sb09g006230
Functional annotation thioredoxin, putative, expressed
UniProt C5YUK4
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF227
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT4G29670 : atypical CYS HIS rich thioredoxin 2
RAP-DB (Rice) LOC_Os05g11090.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a043159 , Zm00025a037101
Brachypodium -
Barley HORVU1Hr1G028680.3 , HORVU1Hr1G028680.2 , HORVU1Hr1G028680.1 , HORVU1Hr1G028680.6 , HORVU1Hr1G028680.5 , HORVU1Hr1G028680.4
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G073900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G077300 thioredoxin, putative, expressed -
2 Sobic.003G003450 - K01177: beta-amylase
3 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
4 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
5 Sobic.007G087100 pentatricopeptide, putative, expressed -
6 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
8 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
9 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
10 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
11 Sobic.001G207800 integral membrane protein, putative, expressed -
12 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
13 Sobic.007G108900 APE1, putative, expressed -
14 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.001G536700 expressed protein -
16 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
17 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
18 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
20 Sobic.001G359300 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic009G073900 Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic009G073900--Sobic001G077300 Sobic003G003450 Sobic003G003450 Sobic009G073900--Sobic003G003450 Sobic006G090100 Sobic006G090100 Sobic009G073900--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic003G094100 Sobic003G094100 Sobic009G073900--Sobic003G094100 Sobic002G081400 Sobic002G081400 Sobic009G073900--Sobic002G081400 Sobic007G135800 Sobic007G135800 Sobic009G073900--Sobic007G135800 Sobic006G213700 Sobic006G213700 Sobic009G073900--Sobic006G213700 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic001G077300--Sobic003G003450 Sobic003G003450--Sobic009G073900 Sobic003G003450--Sobic001G077300 Sobic003G003450--Sobic001G509200 Sobic003G003450--Sobic006G213700 Sobic003G003450--Sobic002G081400 Sobic006G232600 Sobic006G232600 Sobic003G003450--Sobic006G232600 Sobic003G003450--Sobic006G090100 Sobic003G003450--Sobic007G087100 Sobic001G207800 Sobic001G207800 Sobic003G003450--Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic006G090100--Sobic002G081400 Sobic001G509200--Sobic007G135800 Sobic004G103300 Sobic004G103300 Sobic001G509200--Sobic004G103300 Sobic001G393300 Sobic001G393300 Sobic001G509200--Sobic001G393300 Sobic007G108900 Sobic007G108900 Sobic001G509200--Sobic007G108900 Sobic007G166300 Sobic007G166300 Sobic001G509200--Sobic007G166300 Sobic001G509200--Sobic003G094100 Sobic001G509200--Sobic006G213700 Sobic001G509200--Sobic006G090100 Sobic001G509200--Sobic009G073900 Sobic003G380200 Sobic003G380200 Sobic007G087100--Sobic003G380200 Sobic007G087100--Sobic009G073900 Sobic009G170200 Sobic009G170200 Sobic007G087100--Sobic009G170200 Sobic007G087100--Sobic001G077300 Sobic002G356900 Sobic002G356900 Sobic007G087100--Sobic002G356900 Sobic007G087100--Sobic006G232600 Sobic009G103000 Sobic009G103000 Sobic007G087100--Sobic009G103000 Sobic007G087100--Sobic003G003450 Sobic007G087100--Sobic007G135800 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic007G157300 Sobic007G157300 Sobic003G094100--Sobic007G157300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic004G317700 Sobic004G317700 Sobic002G081400--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G081400--Sobic004G271600 Sobic002G081400--Sobic009G073900 Sobic002G081400--Sobic001G077300 Sobic002G081400--Sobic003G003450 Sobic002G081400--Sobic006G090100 Sobic002G081400--Sobic001G509200 Sobic007G124500 Sobic007G124500 Sobic002G081400--Sobic007G124500 Sobic002G081400--Sobic009G170200 Sobic007G135800--Sobic001G509200 Sobic007G135800--Sobic003G094100 Sobic007G135800--Sobic001G393300 Sobic007G135800--Sobic001G180200 Sobic007G135800--Sobic004G103300 Sobic007G135800--Sobic006G213700 Sobic007G135800--Sobic007G166300 Sobic003G409700 Sobic003G409700 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300 Sobic006G213700--Sobic001G509200 Sobic006G213700--Sobic007G135800 Sobic006G213700--Sobic003G380200 Sobic006G213700--Sobic003G003450 Sobic006G213700--Sobic009G073900 Sobic001G499100 Sobic001G499100 Sobic006G213700--Sobic001G499100 Sobic006G213700--Sobic003G094100 Sobic006G213700--Sobic003G409700 Sobic006G213700--Sobic006G090100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.