Gene annotation
Transcriptome id Sobic.009G032200.4,Sobic.009G032200.5,Sobic.009G032200.1
Synonym Sb09g002700
Functional annotation DNA methyltransferase protein, putative, expressed
UniProt A0A1B6P6E5 , A0A1B6P6F0
Pfam -
Panther DB PTHR23068 PTHR23068:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17310 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os05g04330.1 : DNA methyltransferase protein, putative, expressed
MaizeGDB (Corn) Zm00025a038150 , Zm00025a038146
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G236200 RecF/RecN/SMC N terminal domain containing protein, expressed -
2 Sobic.010G233000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
4 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1
5 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
6 Sobic.009G257500 expressed protein -
7 Sobic.003G221500 CENP-C1, putative, expressed -
8 Sobic.010G215900 type II intron maturase protein, putative, expressed -
9 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
10 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.004G111000 bromodomain containing protein, expressed -
12 Sobic.003G114500 zinc knuckle family protein, putative, expressed -
13 Sobic.004G020100 division protein, putative, expressed -
14 Sobic.004G020900 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
15 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
16 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
17 Sobic.002G016600 OsFBD13 - F-box and FBD domain containing protein, expressed -
18 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
19 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
20 Sobic.002G254800 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III


Gene co-expression network
sample Sobic009G032200 Sobic009G032200 Sobic010G236200 Sobic010G236200 Sobic009G032200--Sobic010G236200 Sobic010G233000 Sobic010G233000 Sobic009G032200--Sobic010G233000 Sobic010G269300 Sobic010G269300 Sobic009G032200--Sobic010G269300 Sobic004G043750 Sobic004G043750 Sobic009G032200--Sobic004G043750 Sobic008G057000 Sobic008G057000 Sobic009G032200--Sobic008G057000 Sobic009G257500 Sobic009G257500 Sobic009G032200--Sobic009G257500 Sobic003G221500 Sobic003G221500 Sobic009G032200--Sobic003G221500 Sobic010G215900 Sobic010G215900 Sobic009G032200--Sobic010G215900 Sobic001G135500 Sobic001G135500 Sobic009G032200--Sobic001G135500 Sobic010G236200--Sobic009G032200 Sobic010G236200--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic010G236200--Sobic010G149600 Sobic010G236200--Sobic004G043750 Sobic010G236200--Sobic003G221500 Sobic004G111000 Sobic004G111000 Sobic010G236200--Sobic004G111000 Sobic002G254800 Sobic002G254800 Sobic010G236200--Sobic002G254800 Sobic010G236200--Sobic009G257500 Sobic007G125700 Sobic007G125700 Sobic010G236200--Sobic007G125700 Sobic010G233000--Sobic009G032200 Sobic004G006600 Sobic004G006600 Sobic010G233000--Sobic004G006600 Sobic010G233000--Sobic004G043750 Sobic001G484200 Sobic001G484200 Sobic010G233000--Sobic001G484200 Sobic004G177600 Sobic004G177600 Sobic010G233000--Sobic004G177600 Sobic010G233000--Sobic010G236200 Sobic010G233000--Sobic008G057000 Sobic010G233000--Sobic010G215900 Sobic010G233000--Sobic003G221500 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic010G269300--Sobic008G080500 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic010G269300--Sobic009G032200 Sobic009G190200 Sobic009G190200 Sobic004G043750--Sobic009G190200 Sobic006G280100 Sobic006G280100 Sobic004G043750--Sobic006G280100 Sobic009G259900 Sobic009G259900 Sobic004G043750--Sobic009G259900 Sobic004G043750--Sobic010G236200 Sobic001G395200 Sobic001G395200 Sobic004G043750--Sobic001G395200 Sobic004G043750--Sobic004G111000 Sobic004G043750--Sobic010G269300 Sobic004G043750--Sobic007G125700 Sobic004G043750--Sobic010G233000 Sobic003G409200 Sobic003G409200 Sobic008G057000--Sobic003G409200 Sobic005G200800 Sobic005G200800 Sobic008G057000--Sobic005G200800 Sobic001G346900 Sobic001G346900 Sobic008G057000--Sobic001G346900 Sobic004G086200 Sobic004G086200 Sobic008G057000--Sobic004G086200 Sobic002G148400 Sobic002G148400 Sobic008G057000--Sobic002G148400 Sobic008G057000--Sobic010G279900 Sobic008G057000--Sobic001G484200 Sobic008G057000--Sobic009G032200 Sobic007G183300 Sobic007G183300 Sobic008G057000--Sobic007G183300 Sobic006G126600 Sobic006G126600 Sobic009G257500--Sobic006G126600 Sobic009G257500--Sobic009G032200 Sobic008G045800 Sobic008G045800 Sobic009G257500--Sobic008G045800 Sobic003G415100 Sobic003G415100 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic010G189100 Sobic010G189100 Sobic009G257500--Sobic010G189100 Sobic009G257500--Sobic010G236200 Sobic008G156200 Sobic008G156200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic004G256300 Sobic004G256300 Sobic003G221500--Sobic004G256300 Sobic002G142700 Sobic002G142700 Sobic003G221500--Sobic002G142700 Sobic003G004600 Sobic003G004600 Sobic003G221500--Sobic003G004600 Sobic003G221500--Sobic010G236200 Sobic001G462600 Sobic001G462600 Sobic003G221500--Sobic001G462600 Sobic006G245700 Sobic006G245700 Sobic003G221500--Sobic006G245700 Sobic003G221500--Sobic009G032200 Sobic010G154000 Sobic010G154000 Sobic003G221500--Sobic010G154000 Sobic003G222700 Sobic003G222700 Sobic003G221500--Sobic003G222700 Sobic010G215900--Sobic003G409200 Sobic004G285000 Sobic004G285000 Sobic010G215900--Sobic004G285000 Sobic010G215900--Sobic004G111000 Sobic010G215900--Sobic001G346900 Sobic001G013300 Sobic001G013300 Sobic010G215900--Sobic001G013300 Sobic006G226300 Sobic006G226300 Sobic010G215900--Sobic006G226300 Sobic008G147200 Sobic008G147200 Sobic010G215900--Sobic008G147200 Sobic003G042400 Sobic003G042400 Sobic010G215900--Sobic003G042400 Sobic004G155600 Sobic004G155600 Sobic010G215900--Sobic004G155600 Sobic003G212900 Sobic003G212900 Sobic001G135500--Sobic003G212900 Sobic010G077500 Sobic010G077500 Sobic001G135500--Sobic010G077500 Sobic002G245000 Sobic002G245000 Sobic001G135500--Sobic002G245000 Sobic007G187600 Sobic007G187600 Sobic001G135500--Sobic007G187600 Sobic002G390400 Sobic002G390400 Sobic001G135500--Sobic002G390400 Sobic008G021000 Sobic008G021000 Sobic001G135500--Sobic008G021000 Sobic009G045200 Sobic009G045200 Sobic001G135500--Sobic009G045200 Sobic001G005600 Sobic001G005600 Sobic001G135500--Sobic001G005600 Sobic001G034500 Sobic001G034500 Sobic001G135500--Sobic001G034500
Octagon: transcription factors


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