Gene annotation
| Transcriptome id |
Sobic.007G145300.2 |
| Synonym |
|
| Functional annotation |
zinc knuckle family protein, expressed |
| UniProt |
A0A1Z5R9X6 |
| Pfam |
- |
| Panther DB |
PTHR33075
PTHR33075:SF4 |
| NCBI CDD |
- |
| KEGG Orthology |
- |
| Gene Ontology |
- |
Orthologs (automatic annotation)
| TAIR |
AT1G75560 : zinc knuckle (CCHC-type) family protein |
| RAP-DB (Rice) |
LOC_Os06g28300.1 : zinc knuckle family protein, expressed |
| MaizeGDB (Corn) |
- |
| Brachypodium |
- |
| Barley |
- |
| Wheat |
- |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.009G197350 |
- |
- |
| 2 |
Sobic.009G156700 |
protein transport protein, putative, expressed |
- |
| 3 |
Sobic.002G269800 |
- |
- |
| 4 |
Sobic.002G124766 |
- |
- |
| 5 |
Sobic.003G126700 |
NB-ARC domain containing protein, expressed |
- |
| 6 |
Sobic.007G003300 |
- |
- |
| 7 |
Sobic.002G082350 |
- |
- |
| 8 |
Sobic.006G223700 |
ABC transporter, ATP-binding protein, putative, expressed |
- |
| 9 |
Sobic.010G064050 |
- |
- |
| 10 |
Sobic.001G100650 |
- |
- |
| 11 |
Sobic.007G193000 |
expressed protein |
- |
| 12 |
Sobic.008G191800 |
B3 DNA binding domain containing protein, expressed |
- |
| 13 |
Sobic.005G080075 |
- |
- |
| 14 |
Sobic.002G313850 |
- |
- |
| 15 |
Sobic.009G073200 |
expressed protein |
- |
| 16 |
Sobic.003G008400 |
acetyltransferase, GNAT family protein, expressed |
- |
| 17 |
Sobic.001G413400 |
matrix attachment region binding protein, putative, expressed |
- |
| 18 |
Sobic.008G154200 |
helix-loop-helix DNA-binding domain containing protein, expressed |
- |
| 19 |
Sobic.009G055700 |
splicing factor, arginine/serine-rich, putative, expressed |
K12896: splicing factor, arginine/serine-rich 7 |
| 20 |
Sobic.003G242300 |
ZOS1-19 - C2H2 zinc finger protein, expressed |
- |
Gene co-expression network
|
|
Octagon: transcription factors