Gene annotation
Transcriptome id Sobic.006G203100.1
Synonym Sb06g027440
Functional annotation expressed protein
UniProt C5YF58
Pfam -
Panther DB PTHR36779
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19140 : -
RAP-DB (Rice) LOC_Os04g51166.1 : expressed protein
MaizeGDB (Corn) Zm00025a009946
Brachypodium KQJ84393
Barley HORVU2Hr1G101940.1 , HORVU2Hr1G101940.2
Wheat TraesCS2B02G458900 , TraesCS2D02G436000 , TraesCS2A02G438400
Populus -


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cDNA sequences
Sobic.006G203100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
2 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
3 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
4 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
5 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
7 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
8 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
9 Sobic.006G183000 RING zinc finger protein, putative, expressed -
10 Sobic.002G398000 SFT2, putative, expressed -
11 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
12 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
13 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
15 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
16 Sobic.009G108500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
17 Sobic.003G130600 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
18 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
19 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
20 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic006G203100 Sobic006G203100 Sobic002G256200 Sobic002G256200 Sobic006G203100--Sobic002G256200 Sobic010G073100 Sobic010G073100 Sobic006G203100--Sobic010G073100 Sobic002G341800 Sobic002G341800 Sobic006G203100--Sobic002G341800 Sobic008G145100 Sobic008G145100 Sobic006G203100--Sobic008G145100 Sobic001G338400 Sobic001G338400 Sobic006G203100--Sobic001G338400 Sobic001G145500 Sobic001G145500 Sobic006G203100--Sobic001G145500 Sobic002G029300 Sobic002G029300 Sobic006G203100--Sobic002G029300 Sobic001G249700 Sobic001G249700 Sobic006G203100--Sobic001G249700 Sobic006G183000 Sobic006G183000 Sobic006G203100--Sobic006G183000 Sobic010G269100 Sobic010G269100 Sobic002G256200--Sobic010G269100 Sobic003G099300 Sobic003G099300 Sobic002G256200--Sobic003G099300 Sobic003G422900 Sobic003G422900 Sobic002G256200--Sobic003G422900 Sobic001G085100 Sobic001G085100 Sobic002G256200--Sobic001G085100 Sobic009G117500 Sobic009G117500 Sobic002G256200--Sobic009G117500 Sobic002G268400 Sobic002G268400 Sobic002G256200--Sobic002G268400 Sobic001G428800 Sobic001G428800 Sobic002G256200--Sobic001G428800 Sobic002G256200--Sobic006G203100 Sobic006G056200 Sobic006G056200 Sobic002G256200--Sobic006G056200 Sobic002G113800 Sobic002G113800 Sobic010G073100--Sobic002G113800 Sobic010G073100--Sobic008G145100 Sobic007G184500 Sobic007G184500 Sobic010G073100--Sobic007G184500 Sobic001G033500 Sobic001G033500 Sobic010G073100--Sobic001G033500 Sobic010G073100--Sobic006G203100 Sobic004G010900 Sobic004G010900 Sobic010G073100--Sobic004G010900 Sobic002G281300 Sobic002G281300 Sobic010G073100--Sobic002G281300 Sobic006G044600 Sobic006G044600 Sobic010G073100--Sobic006G044600 Sobic001G010700 Sobic001G010700 Sobic010G073100--Sobic001G010700 Sobic001G458700 Sobic001G458700 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic001G481700 Sobic001G481700 Sobic002G341800--Sobic001G481700 Sobic007G176200 Sobic007G176200 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G394600 Sobic002G394600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800 Sobic008G145100--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic008G145100--Sobic002G423800 Sobic008G110500 Sobic008G110500 Sobic008G145100--Sobic008G110500 Sobic001G444300 Sobic001G444300 Sobic008G145100--Sobic001G444300 Sobic008G145100--Sobic002G029300 Sobic008G145100--Sobic001G033500 Sobic008G145100--Sobic004G010900 Sobic008G145100--Sobic006G203100 Sobic008G129600 Sobic008G129600 Sobic008G145100--Sobic008G129600 Sobic003G348800 Sobic003G348800 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G281900 Sobic001G281900 Sobic001G338400--Sobic001G281900 Sobic001G338400--Sobic001G145500 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic001G145500--Sobic001G444300 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G145500--Sobic001G281900 Sobic001G145500--Sobic007G176200 Sobic001G145500--Sobic004G010900 Sobic006G252200 Sobic006G252200 Sobic001G145500--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic001G145500--Sobic003G330500 Sobic001G145500--Sobic002G029300 Sobic001G023100 Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic007G173700 Sobic007G173700 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic002G029300--Sobic006G056200 Sobic009G033900 Sobic009G033900 Sobic001G249700--Sobic009G033900 Sobic010G247400 Sobic010G247400 Sobic001G249700--Sobic010G247400 Sobic009G164000 Sobic009G164000 Sobic001G249700--Sobic009G164000 Sobic004G156800 Sobic004G156800 Sobic001G249700--Sobic004G156800 Sobic001G249700--Sobic002G256200 Sobic001G259000 Sobic001G259000 Sobic001G249700--Sobic001G259000 Sobic006G270600 Sobic006G270600 Sobic001G249700--Sobic006G270600 Sobic001G168900 Sobic001G168900 Sobic001G249700--Sobic001G168900 Sobic004G356900 Sobic004G356900 Sobic001G249700--Sobic004G356900 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600
Octagon: transcription factors


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