Gene annotation
Transcriptome id Sobic.003G438700.1
Synonym Sb03g046890
Functional annotation AWPM-19-like membrane family protein, putative, expressed
UniProt C5XJ89
Pfam PF05512
Panther DB PTHR33294 PTHR33294:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04560 : AWPM-19-like family protein
RAP-DB (Rice) LOC_Os07g24000.1 : AWPM-19-like membrane family protein, putative, expressed
MaizeGDB (Corn) Zm00025a025877
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G438700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G313800 - -
2 Sobic.006G154300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
3 Sobic.009G010150 - -
4 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
7 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
8 Sobic.005G223200 - -
9 Sobic.009G009900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inhibitor I family protein, putative, expressed -
10 Sobic.009G010000 expressed protein -
11 Sobic.005G199300 expressed protein -
12 Sobic.003G392500 cytochrome P450, putative, expressed -
13 Sobic.007G036600 expressed protein -
14 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
16 Sobic.003G101100 no apical meristem protein, putative, expressed -
17 Sobic.006G031600 expressed protein -
18 Sobic.001G326000 expressed protein -
19 Sobic.010G142300 - -
20 Sobic.003G105600 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic003G438700 Sobic003G438700 Sobic004G313800 Sobic004G313800 Sobic003G438700--Sobic004G313800 Sobic006G154300 Sobic006G154300 Sobic003G438700--Sobic006G154300 Sobic009G010150 Sobic009G010150 Sobic003G438700--Sobic009G010150 Sobic002G274900 Sobic002G274900 Sobic003G438700--Sobic002G274900 Sobic007G001600 Sobic007G001600 Sobic003G438700--Sobic007G001600 Sobic006G059900 Sobic006G059900 Sobic003G438700--Sobic006G059900 Sobic003G226000 Sobic003G226000 Sobic003G438700--Sobic003G226000 Sobic005G223200 Sobic005G223200 Sobic003G438700--Sobic005G223200 Sobic009G009900 Sobic009G009900 Sobic003G438700--Sobic009G009900 Sobic004G313800--Sobic003G438700 Sobic004G313800--Sobic006G154300 Sobic004G313800--Sobic009G010150 Sobic004G313800--Sobic005G223200 Sobic004G313800--Sobic009G009900 Sobic009G010000 Sobic009G010000 Sobic004G313800--Sobic009G010000 Sobic004G313800--Sobic007G001600 Sobic003G392500 Sobic003G392500 Sobic004G313800--Sobic003G392500 Sobic007G156300 Sobic007G156300 Sobic004G313800--Sobic007G156300 Sobic006G154300--Sobic009G010150 Sobic006G154300--Sobic002G274900 Sobic006G154300--Sobic007G001600 Sobic006G154300--Sobic004G313800 Sobic006G154300--Sobic003G226000 Sobic006G154300--Sobic003G438700 Sobic005G199300 Sobic005G199300 Sobic006G154300--Sobic005G199300 Sobic006G154300--Sobic009G010000 Sobic006G154300--Sobic009G009900 Sobic009G010150--Sobic006G154300 Sobic009G010150--Sobic002G274900 Sobic009G010150--Sobic007G001600 Sobic009G010150--Sobic003G226000 Sobic009G010150--Sobic005G199300 Sobic009G010150--Sobic009G010000 Sobic009G010150--Sobic004G313800 Sobic007G036600 Sobic007G036600 Sobic009G010150--Sobic007G036600 Sobic009G010150--Sobic003G438700 Sobic002G274900--Sobic003G226000 Sobic002G274900--Sobic007G001600 Sobic002G274900--Sobic009G010150 Sobic002G274900--Sobic005G199300 Sobic002G274900--Sobic006G154300 Sobic002G362400 Sobic002G362400 Sobic002G274900--Sobic002G362400 Sobic002G370300 Sobic002G370300 Sobic002G274900--Sobic002G370300 Sobic002G274900--Sobic009G010000 Sobic002G274900--Sobic007G036600 Sobic007G001600--Sobic005G199300 Sobic007G001600--Sobic003G226000 Sobic007G001600--Sobic002G274900 Sobic007G001600--Sobic009G010000 Sobic007G001600--Sobic009G010150 Sobic007G001600--Sobic006G154300 Sobic007G001600--Sobic002G370300 Sobic007G001600--Sobic003G392500 Sobic007G001600--Sobic002G362400 Sobic006G059900--Sobic003G438700 Sobic006G059900--Sobic004G313800 Sobic008G013100 Sobic008G013100 Sobic006G059900--Sobic008G013100 Sobic006G059900--Sobic005G223200 Sobic003G105600 Sobic003G105600 Sobic006G059900--Sobic003G105600 Sobic001G326000 Sobic001G326000 Sobic006G059900--Sobic001G326000 Sobic006G059900--Sobic006G154300 Sobic006G059900--Sobic007G156300 Sobic006G059900--Sobic009G010150 Sobic003G226000--Sobic002G274900 Sobic003G226000--Sobic005G199300 Sobic003G226000--Sobic007G001600 Sobic003G226000--Sobic009G010150 Sobic003G226000--Sobic002G362400 Sobic003G226000--Sobic002G370300 Sobic003G226000--Sobic006G154300 Sobic003G226000--Sobic009G010000 Sobic003G101100 Sobic003G101100 Sobic003G226000--Sobic003G101100 Sobic010G142300 Sobic010G142300 Sobic005G223200--Sobic010G142300 Sobic005G223200--Sobic004G313800 Sobic006G031600 Sobic006G031600 Sobic005G223200--Sobic006G031600 Sobic006G034275 Sobic006G034275 Sobic005G223200--Sobic006G034275 Sobic005G223200--Sobic007G156300 Sobic005G223200--Sobic003G392500 Sobic005G223200--Sobic009G009900 Sobic005G223200--Sobic009G010000 Sobic005G223200--Sobic006G154300 Sobic009G009900--Sobic009G010000 Sobic009G009900--Sobic003G392500 Sobic009G009900--Sobic007G001600 Sobic009G009900--Sobic004G313800 Sobic009G009900--Sobic005G199300 Sobic009G009900--Sobic006G154300 Sobic009G009900--Sobic006G031600 Sobic009G009900--Sobic009G010150 Sobic009G009900--Sobic010G142300
Octagon: transcription factors


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