Gene annotation
| Transcriptome id | Sobic.003G389400.4,Sobic.003G389400.3,Sobic.003G389400.1,Sobic.003G389400.5,Sobic.003G389400.2 |
|---|---|
| Synonym | PLP4, Sb03g042730, AtPLAIVC, PLAV |
| Functional annotation | patatin, putative, expressed |
| UniProt | A0A1B6Q7L5 , C5XFD7 |
| Pfam | PF01734 |
| Panther DB | PTHR32176 PTHR32176:SF11 |
| NCBI CDD | KOG0513; Ca2+-independent phospholipase A2 |
| KEGG Orthology | - |
| Gene Ontology | GO:0006629; lipid metabolic process |
Orthologs (automatic annotation)
| TAIR | AT4G37050 : phospholipase A 2A,PATATIN-like protein 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g67310.1 : patatin, putative, expressed |
| MaizeGDB (Corn) | Zm00025a026421 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G193100 | "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- | - |
| 2 | Sobic.005G192801 | "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) | - |
| 3 | Sobic.001G381250 | - | - |
| 4 | Sobic.001G381250 | - | - |
| 5 | Sobic.001G381250 | - | - |
| 6 | Sobic.001G381250 | - | - |
| 7 | Sobic.001G381250 | - | - |
| 8 | Sobic.001G381250 | - | - |
| 9 | Sobic.001G381250 | - | - |
| 10 | Sobic.001G381250 | - | - |
| 11 | Sobic.001G381250 | - | - |
| 12 | Sobic.001G381250 | - | - |
| 13 | Sobic.001G381250 | - | - |
| 14 | Sobic.001G381250 | - | - |
| 15 | Sobic.001G381250 | - | - |
| 16 | Sobic.001G381250 | - | - |
| 17 | Sobic.001G381250 | - | - |
| 18 | Sobic.001G381250 | - | - |
| 19 | Sobic.005G192901 | "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) | - |
| 20 | Sobic.005G185600 | - | - |
Gene co-expression network
Octagon: transcription factors
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