Gene annotation
Transcriptome id Sobic.003G191800.1,Sobic.003G191800.4,Sobic.003G191800.3,Sobic.003G191800.2
Synonym Sb03g025570
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1W0VY09 , A0A1W0VY07
Pfam -
Panther DB PTHR12565 PTHR12565:SF168 PTHR12565:SF168 PTHR12565
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21330 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g38610.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044411 , Zm00025a038373 , Zm00025a028423
Brachypodium KQK09409 , KQK08358
Barley HORVU1Hr1G079450.1 , HORVU1Hr1G079450.2 , HORVU3Hr1G048770.2 , HORVU3Hr1G066600.7 , HORVU3Hr1G066600.6 , HORVU3Hr1G066600.5 , HORVU3Hr1G066600.4 , HORVU3Hr1G066600.3 , HORVU3Hr1G066600.2 , HORVU3Hr1G066600.1 , HORVU3Hr1G048770.1
Wheat TraesCS3D02G208500 , TraesCS3D02G208500 , TraesCS3B02G233700 , TraesCS3B02G233700 , TraesCS3A02G207300 , TraesCS3A02G207300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
2 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G137200 homeobox domain containing protein, expressed -
4 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
5 Sobic.001G483700 Cupin domain containing protein, expressed -
6 Sobic.005G209800 nodulin, putative, expressed -
7 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
8 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
9 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
10 Sobic.002G285525 - -
11 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.001G527400 - -
13 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
14 Sobic.008G023000 expressed protein -
15 Sobic.004G226300 expressed protein -
16 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
17 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
18 Sobic.002G048250 - -
19 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
20 Sobic.004G224300 5-azacytidine resistance protein related, putative, expressed -


Gene co-expression network
sample Sobic003G191800 Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic003G191800--Sobic005G102200 Sobic010G152700 Sobic010G152700 Sobic003G191800--Sobic010G152700 Sobic001G137200 Sobic001G137200 Sobic003G191800--Sobic001G137200 Sobic007G139000 Sobic007G139000 Sobic003G191800--Sobic007G139000 Sobic001G483700 Sobic001G483700 Sobic003G191800--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic003G191800--Sobic005G209800 Sobic007G072400 Sobic007G072400 Sobic003G191800--Sobic007G072400 Sobic006G171000 Sobic006G171000 Sobic003G191800--Sobic006G171000 Sobic008G002100 Sobic008G002100 Sobic003G191800--Sobic008G002100 Sobic005G102200--Sobic003G191800 Sobic005G102200--Sobic010G152700 Sobic005G102200--Sobic001G137200 Sobic005G102200--Sobic001G483700 Sobic002G101800 Sobic002G101800 Sobic005G102200--Sobic002G101800 Sobic002G285525 Sobic002G285525 Sobic005G102200--Sobic002G285525 Sobic001G527400 Sobic001G527400 Sobic005G102200--Sobic001G527400 Sobic005G102200--Sobic005G209800 Sobic005G102200--Sobic008G002100 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic007G183000 Sobic007G183000 Sobic010G152700--Sobic007G183000 Sobic008G023000 Sobic008G023000 Sobic010G152700--Sobic008G023000 Sobic004G226300 Sobic004G226300 Sobic010G152700--Sobic004G226300 Sobic010G152700--Sobic002G285525 Sobic001G137200--Sobic002G285525 Sobic001G137200--Sobic010G152700 Sobic001G137200--Sobic006G171000 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic001G137200--Sobic008G002100 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G137200--Sobic001G527400 Sobic007G139000--Sobic003G191800 Sobic007G139000--Sobic005G102200 Sobic007G139000--Sobic001G137200 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic003G111600 Sobic003G111600 Sobic007G139000--Sobic003G111600 Sobic007G139000--Sobic001G483700 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900 Sobic001G483700--Sobic004G226300 Sobic001G483700--Sobic007G183000 Sobic001G483700--Sobic005G209800 Sobic001G483700--Sobic001G137200 Sobic001G483700--Sobic002G285525 Sobic001G483700--Sobic001G527400 Sobic001G483700--Sobic008G002100 Sobic003G104900 Sobic003G104900 Sobic001G483700--Sobic003G104900 Sobic001G483700--Sobic008G023000 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G231800 Sobic005G231800 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic003G173032 Sobic003G173032 Sobic005G209800--Sobic003G173032 Sobic002G048250 Sobic002G048250 Sobic005G209800--Sobic002G048250 Sobic007G072400--Sobic001G527400 Sobic007G072400--Sobic006G171000 Sobic007G072400--Sobic008G002100 Sobic007G072400--Sobic005G209800 Sobic007G072400--Sobic007G183000 Sobic007G072400--Sobic008G023000 Sobic007G072400--Sobic004G226300 Sobic007G072400--Sobic003G173032 Sobic007G072400--Sobic001G137200 Sobic006G171000--Sobic008G023000 Sobic006G171000--Sobic004G226300 Sobic006G171000--Sobic008G002100 Sobic006G171000--Sobic007G183000 Sobic006G171000--Sobic001G527400 Sobic006G171000--Sobic005G209800 Sobic006G171000--Sobic005G231800 Sobic006G171000--Sobic003G173032 Sobic006G171000--Sobic002G048250 Sobic008G002100--Sobic008G023000 Sobic008G002100--Sobic001G527400 Sobic008G002100--Sobic005G209800 Sobic008G002100--Sobic007G183000 Sobic008G002100--Sobic004G226300 Sobic008G002100--Sobic005G231800 Sobic008G002100--Sobic003G173032 Sobic008G002100--Sobic002G048250 Sobic008G002100--Sobic006G171000
Octagon: transcription factors


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