Gene annotation
Transcriptome id Sobic.003G143900.1
Synonym Sb03g012440
Functional annotation kelch motif family protein, putative, expressed
UniProt C5XI56
Pfam PF13418 PF13415
Panther DB PTHR23244 PTHR23244:SF294
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18610 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os01g19480.1 : kelch motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a024284 , Zm00025a036108
Brachypodium KQK04072
Barley HORVU3Hr1G040720.21 , HORVU3Hr1G040720.1 , HORVU3Hr1G040720.2 , HORVU3Hr1G040720.3 , HORVU3Hr1G040720.4 , HORVU3Hr1G040720.5 , HORVU3Hr1G040720.6 , HORVU3Hr1G040720.7 , HORVU3Hr1G040720.8 , HORVU3Hr1G040720.9 , HORVU3Hr1G040720.18 , HORVU3Hr1G040720.19 , HORVU3Hr1G040720.12 , HORVU3Hr1G040720.13 , HORVU3Hr1G040720.10 , HORVU3Hr1G040720.11 , HORVU3Hr1G040720.16 , HORVU3Hr1G040720.17 , HORVU3Hr1G040720.14 , HORVU3Hr1G040720.15 , HORVU3Hr1G040720.22 , HORVU3Hr1G040720.20 , HORVU3Hr1G040720.24
Wheat TraesCS3B02G221000 , TraesCS3D02G195400 , TraesCS3B02G221000 , TraesCS3A02G192200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G034100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -
2 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
3 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
4 Sobic.003G006900 microtubule associated protein, putative, expressed -
5 Sobic.006G046600 expressed protein -
6 Sobic.003G362300 expressed protein -
7 Sobic.003G027800 protein kinase family protein, putative, expressed -
8 Sobic.003G410700 exostosin family domain containing protein, expressed -
9 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
10 Sobic.002G293700 ATXR, putative, expressed -
11 Sobic.007G211300 OTU-like cysteine protease family protein, putative, expressed -
12 Sobic.003G420300 zinc finger protein, putative, expressed -
13 Sobic.002G374400 -(PubMedID : 23108465)@"DEP2(Ortholog in rice:Li et al., 2010)"(PubMedID : 31659864)@expressed protein -
14 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.009G167100 TBC domain containing protein, expressed -
16 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.005G156100 Long chain acyl CoA synthetase 2 LACS2 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
19 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase


Gene co-expression network
sample Sobic003G143900 Sobic003G143900 Sobic005G034100 Sobic005G034100 Sobic003G143900--Sobic005G034100 Sobic001G494100 Sobic001G494100 Sobic003G143900--Sobic001G494100 Sobic004G234500 Sobic004G234500 Sobic003G143900--Sobic004G234500 Sobic003G006900 Sobic003G006900 Sobic003G143900--Sobic003G006900 Sobic006G046600 Sobic006G046600 Sobic003G143900--Sobic006G046600 Sobic003G362300 Sobic003G362300 Sobic003G143900--Sobic003G362300 Sobic003G027800 Sobic003G027800 Sobic003G143900--Sobic003G027800 Sobic003G410700 Sobic003G410700 Sobic003G143900--Sobic003G410700 Sobic003G100700 Sobic003G100700 Sobic003G143900--Sobic003G100700 Sobic005G034100--Sobic003G143900 Sobic003G420300 Sobic003G420300 Sobic005G034100--Sobic003G420300 Sobic003G226700 Sobic003G226700 Sobic005G034100--Sobic003G226700 Sobic007G084200 Sobic007G084200 Sobic005G034100--Sobic007G084200 Sobic003G389100 Sobic003G389100 Sobic005G034100--Sobic003G389100 Sobic003G292700 Sobic003G292700 Sobic005G034100--Sobic003G292700 Sobic003G370300 Sobic003G370300 Sobic005G034100--Sobic003G370300 Sobic006G275500 Sobic006G275500 Sobic005G034100--Sobic006G275500 Sobic002G215200 Sobic002G215200 Sobic005G034100--Sobic002G215200 Sobic001G494100--Sobic006G046600 Sobic008G169400 Sobic008G169400 Sobic001G494100--Sobic008G169400 Sobic005G204100 Sobic005G204100 Sobic001G494100--Sobic005G204100 Sobic004G227500 Sobic004G227500 Sobic001G494100--Sobic004G227500 Sobic003G277900 Sobic003G277900 Sobic001G494100--Sobic003G277900 Sobic006G262100 Sobic006G262100 Sobic001G494100--Sobic006G262100 Sobic002G216600 Sobic002G216600 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G315400 Sobic001G315400 Sobic001G494100--Sobic001G315400 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic006G142500 Sobic006G142500 Sobic004G234500--Sobic006G142500 Sobic010G086000 Sobic010G086000 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G267600 Sobic004G267600 Sobic004G234500--Sobic004G267600 Sobic009G127800 Sobic009G127800 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic002G027600 Sobic002G027600 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic003G006900--Sobic003G027800 Sobic003G006900--Sobic006G046600 Sobic008G015200 Sobic008G015200 Sobic003G006900--Sobic008G015200 Sobic003G006900--Sobic003G410700 Sobic009G167100 Sobic009G167100 Sobic003G006900--Sobic009G167100 Sobic003G006900--Sobic003G277900 Sobic005G021900 Sobic005G021900 Sobic003G006900--Sobic005G021900 Sobic006G257200 Sobic006G257200 Sobic003G006900--Sobic006G257200 Sobic006G179300 Sobic006G179300 Sobic003G006900--Sobic006G179300 Sobic006G046600--Sobic001G494100 Sobic001G384700 Sobic001G384700 Sobic006G046600--Sobic001G384700 Sobic009G141700 Sobic009G141700 Sobic006G046600--Sobic009G141700 Sobic010G173700 Sobic010G173700 Sobic006G046600--Sobic010G173700 Sobic006G046600--Sobic002G216600 Sobic006G046600--Sobic008G169400 Sobic001G079900 Sobic001G079900 Sobic006G046600--Sobic001G079900 Sobic008G044600 Sobic008G044600 Sobic006G046600--Sobic008G044600 Sobic006G046600--Sobic003G277900 Sobic004G296200 Sobic004G296200 Sobic003G362300--Sobic004G296200 Sobic004G234300 Sobic004G234300 Sobic003G362300--Sobic004G234300 Sobic003G144600 Sobic003G144600 Sobic003G362300--Sobic003G144600 Sobic003G362300--Sobic003G143900 Sobic004G295700 Sobic004G295700 Sobic003G362300--Sobic004G295700 Sobic005G060766 Sobic005G060766 Sobic003G362300--Sobic005G060766 Sobic004G261200 Sobic004G261200 Sobic003G362300--Sobic004G261200 Sobic004G203500 Sobic004G203500 Sobic003G362300--Sobic004G203500 Sobic007G180900 Sobic007G180900 Sobic003G362300--Sobic007G180900 Sobic002G219900 Sobic002G219900 Sobic003G027800--Sobic002G219900 Sobic003G027800--Sobic008G169400 Sobic007G128100 Sobic007G128100 Sobic003G027800--Sobic007G128100 Sobic008G038200 Sobic008G038200 Sobic003G027800--Sobic008G038200 Sobic005G032600 Sobic005G032600 Sobic003G027800--Sobic005G032600 Sobic003G027800--Sobic009G167100 Sobic009G031500 Sobic009G031500 Sobic003G027800--Sobic009G031500 Sobic001G113800 Sobic001G113800 Sobic003G027800--Sobic001G113800 Sobic003G027800--Sobic006G179300 Sobic004G262600 Sobic004G262600 Sobic003G410700--Sobic004G262600 Sobic003G410700--Sobic004G261200 Sobic009G194200 Sobic009G194200 Sobic003G410700--Sobic009G194200 Sobic003G410700--Sobic003G389100 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G223900 Sobic003G223900 Sobic003G410700--Sobic003G223900 Sobic001G436100 Sobic001G436100 Sobic003G410700--Sobic001G436100 Sobic001G074000 Sobic001G074000 Sobic003G100700--Sobic001G074000 Sobic003G100700--Sobic004G267600 Sobic009G088700 Sobic009G088700 Sobic003G100700--Sobic009G088700 Sobic002G284100 Sobic002G284100 Sobic003G100700--Sobic002G284100 Sobic001G083500 Sobic001G083500 Sobic003G100700--Sobic001G083500 Sobic002G335900 Sobic002G335900 Sobic003G100700--Sobic002G335900 Sobic001G123100 Sobic001G123100 Sobic003G100700--Sobic001G123100 Sobic003G100700--Sobic004G234500 Sobic003G100700--Sobic004G246500
Octagon: transcription factors


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