Hb_006816_400

Information

Type -
Description -
Location Contig6816: 249656-250246
Sequence    

Annotation

kegg
ID pop:POPTR_0013s01310g
description POPTRDRAFT_662643; hypothetical protein
nr
ID XP_012088952.1
description PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
swissprot
ID Q9LZM4
description Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1
trembl
ID A0A067JHK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23259 PE=4 SV=1
Gene Ontology
ID GO:0016301
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_400 0.0 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
2 Hb_001022_040 0.1796359759 - - PREDICTED: uncharacterized protein LOC105634753 [Jatropha curcas]
3 Hb_000693_020 0.2242500717 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
4 Hb_004116_130 0.2599497846 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
5 Hb_007951_130 0.2687879675 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]
6 Hb_004241_010 0.2813274756 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
7 Hb_139138_010 0.2843914261 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
8 Hb_000025_440 0.2844797636 - - PREDICTED: ankyrin repeat-containing protein P16F5.05c-like [Populus euphratica]
9 Hb_000886_030 0.2860823625 - - PREDICTED: uncharacterized protein LOC105113410 [Populus euphratica]
10 Hb_000454_060 0.2907031923 - - Uncharacterized protein TCM_006778 [Theobroma cacao]
11 Hb_182005_010 0.2907101652 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
12 Hb_021888_120 0.2930066134 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
13 Hb_005144_190 0.2943484309 - - hypothetical protein F383_09558 [Gossypium arboreum]
14 Hb_003687_030 0.298279168 - - protein phosphatase 2c, putative [Ricinus communis]
15 Hb_012379_010 0.2989164383 - - -
16 Hb_001065_070 0.3011943907 - - -
17 Hb_128051_010 0.3085279996 - - -
18 Hb_000418_080 0.30919676 - - PREDICTED: uncharacterized protein LOC105124652 [Populus euphratica]
19 Hb_001016_070 0.3097893144 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
20 Hb_001117_120 0.3111720228 - - chloride channel clc, putative [Ricinus communis]

Gene co-expression network

sample Hb_006816_400 Hb_006816_400 Hb_001022_040 Hb_001022_040 Hb_006816_400--Hb_001022_040 Hb_000693_020 Hb_000693_020 Hb_006816_400--Hb_000693_020 Hb_004116_130 Hb_004116_130 Hb_006816_400--Hb_004116_130 Hb_007951_130 Hb_007951_130 Hb_006816_400--Hb_007951_130 Hb_004241_010 Hb_004241_010 Hb_006816_400--Hb_004241_010 Hb_139138_010 Hb_139138_010 Hb_006816_400--Hb_139138_010 Hb_000025_440 Hb_000025_440 Hb_001022_040--Hb_000025_440 Hb_111347_010 Hb_111347_010 Hb_001022_040--Hb_111347_010 Hb_001022_040--Hb_004241_010 Hb_000414_150 Hb_000414_150 Hb_001022_040--Hb_000414_150 Hb_001022_040--Hb_007951_130 Hb_002282_040 Hb_002282_040 Hb_000693_020--Hb_002282_040 Hb_000693_020--Hb_004116_130 Hb_000454_060 Hb_000454_060 Hb_000693_020--Hb_000454_060 Hb_128051_010 Hb_128051_010 Hb_000693_020--Hb_128051_010 Hb_013399_010 Hb_013399_010 Hb_000693_020--Hb_013399_010 Hb_003687_030 Hb_003687_030 Hb_004116_130--Hb_003687_030 Hb_005000_250 Hb_005000_250 Hb_004116_130--Hb_005000_250 Hb_000504_110 Hb_000504_110 Hb_004116_130--Hb_000504_110 Hb_004102_030 Hb_004102_030 Hb_004116_130--Hb_004102_030 Hb_007951_130--Hb_139138_010 Hb_021888_120 Hb_021888_120 Hb_007951_130--Hb_021888_120 Hb_000096_130 Hb_000096_130 Hb_007951_130--Hb_000096_130 Hb_011909_140 Hb_011909_140 Hb_007951_130--Hb_011909_140 Hb_000483_480 Hb_000483_480 Hb_007951_130--Hb_000483_480 Hb_000418_080 Hb_000418_080 Hb_007951_130--Hb_000418_080 Hb_012379_010 Hb_012379_010 Hb_004241_010--Hb_012379_010 Hb_002157_090 Hb_002157_090 Hb_004241_010--Hb_002157_090 Hb_000111_230 Hb_000111_230 Hb_004241_010--Hb_000111_230 Hb_002259_140 Hb_002259_140 Hb_004241_010--Hb_002259_140 Hb_001584_030 Hb_001584_030 Hb_004241_010--Hb_001584_030 Hb_004241_010--Hb_000414_150 Hb_005147_010 Hb_005147_010 Hb_139138_010--Hb_005147_010 Hb_139138_010--Hb_011909_140 Hb_001117_120 Hb_001117_120 Hb_139138_010--Hb_001117_120 Hb_139138_010--Hb_000483_480 Hb_139138_010--Hb_128051_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.273196 0.0720777 0.147237 0 0.0671099
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.309841 0.568168 0 0.0999502 0

CAGE analysis